Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | AMED_RS20125 | Not Available | Negative | 4307231 - 4308427 | 41755.4 |
| serine hydrolase | AMED_RS20130 | Not Available | Negative | 4308424 - 4309887 | 50562.9 |
| hypothetical protein | AMED_RS20135 | Not Available | Negative | 4309890 - 4310570 | 23597.5 |
| cytochrome p450 | AMED_RS20140 | Not Available | Negative | 4310567 - 4311775 | 43580.3 |
| taud/tfda family dioxygenase | AMED_RS20145 | Not Available | Negative | 4311804 - 4312676 | 32341.4 |
| non-ribosomal peptide synthetase | AMED_RS20150 | Not Available | Negative | 4312700 - 4321240 | 303341.0 |
| non-ribosomal peptide synthetase | AMED_RS20155 | Not Available | Negative | 4321237 - 4325070 | 138362.0 |
| sdr family oxidoreductase | AMED_RS20160 | Not Available | Negative | 4325242 - 4325928 | 23807.6 |
| tetr family transcriptional regulator | AMED_RS20165 | Not Available | Positive | 4326007 - 4326576 | 20654.9 |
| expansin exlx1 family cellulose-binding protein | AMED_RS20170 | Not Available | Positive | 4326704 - 4327579 | 29907.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
