Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS20075 | Not Available | Negative | 4297960 - 4298400 | 15991.2 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS20080 | Not Available | Positive | 4298466 - 4299239 | 27241.2 |
| tetr/acrr family transcriptional regulator | AMED_RS20085 | Not Available | Negative | 4299746 - 4300414 | 24082.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS20090 | Not Available | Positive | 4300544 - 4301452 | 32302.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | AMED_RS20095 | Not Available | Negative | 4301601 - 4302776 | 41542.5 |
| carbohydrate abc transporter permease | AMED_RS20100 | Not Available | Negative | 4302778 - 4303605 | 29697.1 |
| carbohydrate abc transporter permease | AMED_RS20105 | Not Available | Negative | 4303605 - 4304552 | 33347.5 |
| abc transporter substrate-binding protein | AMED_RS20110 | Not Available | Negative | 4304557 - 4305825 | 44172.1 |
| fadr/gntr family transcriptional regulator | AMED_RS20115 | Not Available | Positive | 4305977 - 4306735 | 27125.4 |
| l-rhamnose mutarotase | AMED_RS20120 | Not Available | Positive | 4306762 - 4307118 | 14041.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
