Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase-related protein | AMED_RS20025 | Not Available | Negative | 4286307 - 4287911 | 57703.9 |
| btad domain-containing putative transcriptional regulator | AMED_RS20030 | Not Available | Positive | 4288429 - 4291335 | 101428.0 |
| s26 family signal peptidase | AMED_RS20035 | Not Available | Negative | 4291308 - 4291715 | 14629.7 |
| abc transporter atp-binding protein | AMED_RS20040 | Not Available | Negative | 4291715 - 4293520 | 62373.6 |
| hypothetical protein | AMED_RS20045 | Not Available | Negative | 4293517 - 4294008 | 17174.7 |
| maue/doxx family redox-associated membrane protein | AMED_RS20050 | Not Available | Negative | 4294021 - 4294554 | 17716.2 |
| hypothetical protein | AMED_RS20055 | Not Available | Negative | 4294622 - 4294759 | 5040.27 |
| sco6745 family protein | AMED_RS20060 | Not Available | Positive | 4294944 - 4295792 | 30334.9 |
| merr family transcriptional regulator | AMED_RS20065 | Not Available | Negative | 4295838 - 4296233 | 14462.2 |
| long-chain-fatty-acid--coa ligase | AMED_RS20070 | Not Available | Negative | 4296286 - 4297875 | 56162.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
