Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding dehydrogenase | AMED_RS19975 | Not Available | Positive | 4273891 - 4274883 | 32982.8 |
| hypothetical protein | AMED_RS19980 | Not Available | Positive | 4274880 - 4275059 | 6276.56 |
| rna polymerase subunit sigma-70 | AMED_RS19985 | Not Available | Positive | 4275137 - 4276123 | 35824.7 |
| glycoside hydrolase family 9 protein | AMED_RS19990 | Not Available | Negative | 4276131 - 4278806 | 94497.7 |
| ricin domain-containing protein | AMED_RS19995 | Not Available | Positive | 4279188 - 4281296 | 72591.9 |
| ricin domain-containing protein | AMED_RS20000 | Not Available | Positive | 4281329 - 4282804 | 51441.1 |
| hypothetical protein | AMED_RS20005 | Not Available | Negative | 4282832 - 4283959 | 40597.6 |
| metal-dependent hydrolase | AMED_RS48400 | Not Available | Negative | 4284002 - 4284442 | 15953.9 |
| epoxide hydrolase family protein | AMED_RS20015 | Not Available | Negative | 4284491 - 4285654 | 43083.5 |
| abate domain-containing protein | AMED_RS20020 | Not Available | Positive | 4285737 - 4286300 | 19861.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
