Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | AMED_RS19925 | Not Available | Positive | 4256891 - 4258021 | 39457.2 |
| n-acetylglucosamine kinase | AMED_RS19930 | Not Available | Positive | 4258023 - 4258979 | 33236.6 |
| dmt family transporter | AMED_RS19935 | Not Available | Positive | 4258989 - 4259900 | 31555.6 |
| 1-phosphofructokinase family hexose kinase | AMED_RS19940 | Not Available | Positive | 4259897 - 4260829 | 31184.4 |
| class ii fructose-bisphosphate aldolase | AMED_RS19945 | Not Available | Positive | 4260826 - 4261650 | 28630.3 |
| ricin-type beta-trefoil lectin domain protein | AMED_RS19950 | Not Available | Positive | 4261833 - 4263176 | 45550.8 |
| duf6351 family protein | AMED_RS19955 | Not Available | Positive | 4263284 - 4265434 | 75542.9 |
| beta-ketoacyl synthase n-terminal-like domain-containing protein | AMED_RS19960 | Not Available | Positive | 4265454 - 4271843 | 222468.0 |
| cytochrome p450 | AMED_RS19965 | Not Available | Negative | 4271833 - 4273020 | 42834.6 |
| dm13 domain-containing protein | AMED_RS19970 | Not Available | Negative | 4273089 - 4273679 | 20785.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
