Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | AMED_RS19875 | Not Available | Positive | 4243361 - 4245913 | 90776.4 |
| ai-2e family transporter | AMED_RS19880 | Not Available | Negative | 4245927 - 4247144 | 42780.2 |
| smp-30/gluconolactonase/lre family protein | AMED_RS19885 | Not Available | Negative | 4247259 - 4248269 | 35067.8 |
| pqq-dependent sugar dehydrogenase | AMED_RS19890 | Not Available | Negative | 4248332 - 4250065 | 60252.1 |
| alpha-glucosidase/alpha-galactosidase | AMED_RS19895 | Not Available | Negative | 4250365 - 4251672 | 47628.2 |
| carbohydrate abc transporter permease | AMED_RS19900 | Not Available | Negative | 4251709 - 4252590 | 32260.2 |
| carbohydrate abc transporter permease | AMED_RS19905 | Not Available | Negative | 4252587 - 4253408 | 29533.7 |
| abc transporter substrate-binding protein | AMED_RS19910 | Not Available | Negative | 4253571 - 4254836 | 43651.9 |
| endo alpha-1,4 polygalactosaminidase | AMED_RS19915 | Not Available | Negative | 4255051 - 4255866 | 29107.0 |
| deor/glpr family dna-binding transcription regulator | AMED_RS19920 | Not Available | Negative | 4255958 - 4256764 | 28515.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
