Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | AMED_RS19775 | Not Available | Positive | 4220446 - 4223151 | 95168.4 |
| three-helix bundle dimerization domain-containing protein | AMED_RS19780 | Not Available | Negative | 4223356 - 4223571 | 8038.65 |
| hypothetical protein | AMED_RS19785 | Not Available | Negative | 4223657 - 4224073 | 14919.3 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS19790 | Not Available | Negative | 4224163 - 4224954 | 28331.0 |
| mosc and fad-binding oxidoreductase domain-containing protein | AMED_RS19795 | Not Available | Negative | 4224985 - 4226661 | 60670.0 |
| rok family transcriptional regulator | AMED_RS19800 | Not Available | Negative | 4226705 - 4227823 | 37952.3 |
| ybiu family protein | AMED_RS19805 | Not Available | Positive | 4227909 - 4229138 | 45235.8 |
| metal-dependent hydrolase | AMED_RS19810 | Not Available | Negative | 4229149 - 4230506 | 48205.1 |
| hypothetical protein | AMED_RS19815 | Not Available | Negative | 4230512 - 4230877 | 12641.4 |
| apc family permease | AMED_RS19820 | Not Available | Negative | 4230874 - 4232346 | 52005.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
