Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS01885 | Not Available | Negative | 380745 - 381077 | 11666.9 |
| hypothetical protein | AMED_RS01890 | Not Available | Negative | 381070 - 381384 | 11266.9 |
| hypothetical protein | AMED_RS01895 | Not Available | Negative | 381384 - 381614 | 8145.49 |
| hypothetical protein | AMED_RS01900 | Not Available | Negative | 381781 - 381999 | 8388.7 |
| ssga family sporulation/cell division regulator | AMED_RS01905 | Not Available | Negative | 382083 - 382463 | 13136.7 |
| nudix hydrolase | AMED_RS01910 | Not Available | Negative | 382454 - 382978 | 18506.6 |
| hypothetical protein | AMED_RS01915 | Not Available | Negative | 383019 - 383705 | 24488.7 |
| hypothetical protein | AMED_RS01920 | Not Available | Negative | 383812 - 384048 | 8792.58 |
| hypothetical protein | AMED_RS01925 | Not Available | Negative | 384050 - 384307 | 9195.76 |
| gntr family transcriptional regulator | AMED_RS01930 | Not Available | Positive | 384428 - 384775 | 12434.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
