Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | AMED_RS19725 | Not Available | Positive | 4210691 - 4211536 | 29607.6 |
| dihydropteroate synthase | AMED_RS19730 | Not Available | Positive | 4211533 - 4212450 | 32083.6 |
| acyl-coa synthetase | AMED_RS19735 | Not Available | Negative | 4212468 - 4214036 | 55986.9 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS19740 | Not Available | Negative | 4214036 - 4214542 | 18738.5 |
| tetr family transcriptional regulator | AMED_RS19745 | Not Available | Positive | 4214605 - 4215201 | 21231.3 |
| alpha/beta fold hydrolase | AMED_RS19750 | Not Available | Negative | 4215211 - 4216071 | 30557.0 |
| stas domain-containing protein | AMED_RS19755 | Not Available | Negative | 4216535 - 4216879 | 11832.2 |
| tetr/acrr family transcriptional regulator | AMED_RS19760 | Not Available | Positive | 4217131 - 4217739 | 22486.7 |
| fad-binding dehydrogenase | AMED_RS19765 | Not Available | Positive | 4217736 - 4219397 | 59956.2 |
| pig-l deacetylase family protein | AMED_RS19770 | Not Available | Negative | 4219411 - 4220166 | 27314.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
