Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | AMED_RS19675 | Not Available | Positive | 4199956 - 4200417 | 16549.8 |
| fadr/gntr family transcriptional regulator | AMED_RS19680 | Not Available | Positive | 4200428 - 4201174 | 27131.1 |
| acyl-coa dehydrogenase family protein | AMED_RS19685 | Not Available | Positive | 4201223 - 4202374 | 41257.4 |
| helix-turn-helix domain-containing protein | AMED_RS19690 | Not Available | Negative | 4202578 - 4203552 | 34637.7 |
| hypothetical protein | AMED_RS19695 | Not Available | Positive | 4203703 - 4205049 | 49943.0 |
| acyl-coa reductase | AMED_RS19700 | Not Available | Positive | 4205046 - 4206440 | 49244.5 |
| acyl-coa dehydrogenase family protein | AMED_RS19705 | Not Available | Positive | 4206481 - 4207776 | 46326.9 |
| acyl-coa dehydrogenase family protein | AMED_RS19710 | Not Available | Positive | 4207773 - 4208909 | 39901.5 |
| enoyl-coa hydratase-related protein | AMED_RS19715 | Not Available | Positive | 4208916 - 4209776 | 30176.4 |
| fadr/gntr family transcriptional regulator | AMED_RS19720 | Not Available | Negative | 4209784 - 4210539 | 27548.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
