Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMED_RS19625 | Not Available | Negative | 4189862 - 4190779 | 30996.7 |
| serine hydrolase | AMED_RS19630 | Not Available | Positive | 4190841 - 4191944 | 38718.1 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS19635 | Not Available | Positive | 4191956 - 4192711 | 25625.6 |
| enoyl-coa hydratase/isomerase family protein | AMED_RS19640 | Not Available | Positive | 4192723 - 4193499 | 26752.4 |
| enoyl-coa hydratase/isomerase family protein | AMED_RS19645 | Not Available | Negative | 4193507 - 4194313 | 28764.4 |
| acyl-coa dehydrogenase family protein | AMED_RS19650 | Not Available | Positive | 4194399 - 4195538 | 39725.5 |
| acyl-coa dehydrogenase family protein | AMED_RS19655 | Not Available | Positive | 4195562 - 4196740 | 42830.1 |
| amp-binding protein | AMED_RS19660 | Not Available | Positive | 4196821 - 4198410 | 56861.3 |
| thiolase family protein | AMED_RS19665 | Not Available | Positive | 4198407 - 4199552 | 39320.6 |
| zn-ribbon domain-containing ob-fold protein | AMED_RS19670 | Not Available | Positive | 4199552 - 4199944 | 14131.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
