Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | AMED_RS19575 | Not Available | Negative | 4181206 - 4182390 | 45052.1 |
| tetr family transcriptional regulator | AMED_RS19580 | Not Available | Negative | 4182411 - 4182986 | 20668.7 |
| zn-ribbon domain-containing ob-fold protein | AMED_RS19585 | Not Available | Positive | 4183091 - 4183513 | 15652.3 |
| thiolase family protein | AMED_RS19590 | Not Available | Positive | 4183510 - 4184661 | 40042.5 |
| 3-hydroxyacyl-coa dehydrogenase | AMED_RS19595 | Not Available | Positive | 4184690 - 4185451 | 25903.4 |
| doxx family protein | AMED_RS19600 | Not Available | Positive | 4185448 - 4185969 | 17236.2 |
| thiolase family protein | AMED_RS19605 | Not Available | Positive | 4185981 - 4187129 | 39196.6 |
| crotonase/enoyl-coa hydratase family protein | AMED_RS19610 | Not Available | Positive | 4187150 - 4187914 | 26327.6 |
| paai family thioesterase | AMED_RS19615 | Not Available | Positive | 4188001 - 4188423 | 15719.7 |
| family 1 glycosylhydrolase | AMED_RS19620 | Not Available | Negative | 4188429 - 4189775 | 47730.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
