Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | AMED_RS19525 | Not Available | Positive | 4169843 - 4170703 | 29879.2 |
| nad-dependent succinate-semialdehyde dehydrogenase | AMED_RS19530 | Not Available | Negative | 4170707 - 4172140 | 50440.3 |
| acetate--coa ligase family protein | AMED_RS19535 | Not Available | Negative | 4172137 - 4174206 | 69221.3 |
| acyl-coa dehydrogenase family protein | AMED_RS19540 | Not Available | Negative | 4174203 - 4175351 | 40804.5 |
| mmge/prpd family protein | AMED_RS19545 | Not Available | Negative | 4175348 - 4176718 | 46450.0 |
| acyl-coa thioesterase ii | AMED_RS19550 | Not Available | Negative | 4176795 - 4177688 | 32533.6 |
| hypothetical protein | AMED_RS19555 | Not Available | Negative | 4177685 - 4177894 | 7506.69 |
| amidohydrolase family protein | AMED_RS19560 | Not Available | Negative | 4177916 - 4179046 | 42033.6 |
| tetr/acrr family transcriptional regulator | AMED_RS19565 | Not Available | Negative | 4179194 - 4179796 | 21714.7 |
| acyl-coa dehydrogenase family protein | AMED_RS19570 | Not Available | Positive | 4179957 - 4181099 | 42438.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
