Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ii | AMED_RS19475 | Not Available | Positive | 4159427 - 4160272 | 31131.2 |
| maoc family dehydratase n-terminal domain-containing protein | AMED_RS19480 | Not Available | Positive | 4160295 - 4160792 | 17607.0 |
| enoyl-coa hydratase/isomerase family protein | AMED_RS19485 | Not Available | Positive | 4160794 - 4161570 | 27370.8 |
| acyl-coa dehydrogenase family protein | AMED_RS19490 | Not Available | Positive | 4161590 - 4162705 | 39991.1 |
| aldehyde dehydrogenase family protein | AMED_RS19495 | Not Available | Positive | 4162732 - 4164189 | 51950.3 |
| hnh endonuclease signature motif containing protein | AMED_RS19500 | Not Available | Positive | 4164295 - 4165518 | 44033.2 |
| caib/baif coa-transferase family protein | AMED_RS19505 | Not Available | Negative | 4165619 - 4166767 | 40323.3 |
| acetyl-coa c-acyltransferase | AMED_RS19510 | Not Available | Negative | 4166767 - 4167939 | 40671.8 |
| nitronate monooxygenase family protein | AMED_RS19515 | Not Available | Positive | 4168045 - 4169019 | 34474.6 |
| n-acyl homoserine lactonase family protein | AMED_RS19520 | Not Available | Positive | 4169016 - 4169846 | 30023.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
