Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | AMED_RS19425 | Not Available | Positive | 4147537 - 4148085 | 20757.4 |
| tetr/acrr family transcriptional regulator | AMED_RS19430 | Not Available | Negative | 4148096 - 4148740 | 24051.9 |
| phenylacetate--coa ligase family protein | AMED_RS19435 | Not Available | Positive | 4149001 - 4150362 | 49886.5 |
| hypothetical protein | AMED_RS19440 | Not Available | Positive | 4150359 - 4151057 | 24983.1 |
| abc transporter substrate-binding protein | AMED_RS19445 | Not Available | Positive | 4151152 - 4152366 | 41008.5 |
| branched-chain amino acid abc transporter permease/atp-binding protein | AMED_RS19450 | Not Available | Positive | 4152379 - 4155063 | 93220.7 |
| abc transporter atp-binding protein | AMED_RS19455 | Not Available | Positive | 4155060 - 4155788 | 25248.6 |
| enoyl-coa hydratase-related protein | AMED_RS19460 | Not Available | Negative | 4155801 - 4156622 | 29279.2 |
| acyl-coa dehydrogenase family protein | AMED_RS19465 | Not Available | Negative | 4156619 - 4157851 | 45048.8 |
| class i adenylate-forming enzyme family protein | AMED_RS19470 | Not Available | Negative | 4157887 - 4159353 | 51777.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
