Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | AMED_RS19375 | Not Available | Negative | 4140163 - 4141086 | 30688.9 |
| metal-dependent hydrolase | AMED_RS48715 | Not Available | Positive | 4141315 - 4141473 | 5634.7 |
| hypothetical protein | AMED_RS19385 | Not Available | Negative | 4141527 - 4141790 | 9243.73 |
| hypothetical protein | AMED_RS19390 | Not Available | Negative | 4141787 - 4142233 | 15306.5 |
| tetr/acrr family transcriptional regulator | AMED_RS19395 | Not Available | Negative | 4142367 - 4142957 | 21240.5 |
| nadp-dependent oxidoreductase | AMED_RS19400 | Not Available | Positive | 4143042 - 4144061 | 33894.3 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS19405 | Not Available | Positive | 4144103 - 4144873 | 25875.8 |
| llm class flavin-dependent oxidoreductase | AMED_RS19410 | Not Available | Positive | 4144880 - 4145971 | 39147.4 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS19415 | Not Available | Positive | 4145937 - 4146785 | 28754.9 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS19420 | Not Available | Positive | 4146785 - 4147537 | 25619.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
