Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | AMED_RS19325 | Not Available | Positive | 4127417 - 4132993 | 198707.0 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS19330 | Not Available | Negative | 4133083 - 4134021 | 32972.6 |
| metal-dependent hydrolase | AMED_RS19335 | Not Available | Positive | 4134124 - 4134696 | 21430.4 |
| is5 family transposase | AMED_RS19340 | Not Available | Positive | 4134759 - 4135591 | 31053.7 |
| hypothetical protein | AMED_RS19345 | Not Available | Positive | 4135588 - 4135866 | 9879.79 |
| afsr/sarp family transcriptional regulator | AMED_RS19350 | Not Available | Negative | 4135876 - 4137792 | 67742.8 |
| alpha/beta fold hydrolase | AMED_RS19355 | Not Available | Positive | 4137904 - 4138782 | 30592.4 |
| alcohol dehydrogenase catalytic domain-containing protein | AMED_RS19360 | Not Available | Negative | 4138721 - 4139026 | 10539.7 |
| enoyl-coa hydratase/isomerase family protein | AMED_RS19365 | Not Available | Negative | 4139023 - 4139802 | 27746.2 |
| helix-turn-helix domain-containing protein | AMED_RS19370 | Not Available | Positive | 4139785 - 4140126 | 13141.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
