Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrqrl motif-containing zinc-binding protein | AMED_RS01840 | Not Available | Negative | 373039 - 373539 | 18558.5 |
| hypothetical protein | AMED_RS01845 | Not Available | Negative | 373648 - 373848 | 7530.07 |
| bifunctional dna primase/polymerase | AMED_RS01850 | Not Available | Negative | 373880 - 374836 | 33407.3 |
| hypothetical protein | AMED_RS01855 | Not Available | Negative | 374833 - 375129 | 10645.5 |
| single-stranded dna-binding protein | AMED_RS01860 | Not Available | Negative | 375145 - 375618 | 16910.7 |
| hypothetical protein | AMED_RS01865 | Not Available | Negative | 375895 - 376281 | 13307.0 |
| hypothetical protein | AMED_RS01870 | Not Available | Negative | 376415 - 376861 | 16472.6 |
| hypothetical protein | AMED_RS48545 | Not Available | Negative | 377158 - 377385 | 8011.65 |
| cell division protein ftsk | AMED_RS01875 | Not Available | Negative | 377373 - 379469 | 76046.1 |
| hypothetical protein | AMED_RS01880 | Not Available | Negative | 379576 - 380748 | 41286.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
