Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS19175 | Not Available | Positive | 4097182 - 4097646 | 16788.8 |
| adenylate kinase | AMED_RS19180 | Not Available | Negative | 4097681 - 4098172 | 19095.1 |
| hypothetical protein | AMED_RS19185 | Not Available | Positive | 4098370 - 4099605 | 46000.0 |
| alpha/beta fold hydrolase | AMED_RS19190 | Not Available | Negative | 4099607 - 4100644 | 36650.6 |
| class i sam-dependent methyltransferase | AMED_RS19195 | Not Available | Positive | 4100778 - 4101419 | 23245.3 |
| putative quinol monooxygenase | AMED_RS19200 | Not Available | Positive | 4101478 - 4101852 | 13600.2 |
| helix-turn-helix transcriptional regulator | AMED_RS19205 | Not Available | Positive | 4101857 - 4102168 | 11416.6 |
| hypothetical protein | AMED_RS19210 | Not Available | Positive | 4102216 - 4102569 | 13092.5 |
| meds domain-containing protein | AMED_RS19215 | Not Available | Positive | 4102949 - 4103929 | 35068.5 |
| helix-turn-helix transcriptional regulator | AMED_RS19220 | Not Available | Negative | 4103962 - 4104477 | 18606.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
