Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | AMED_RS19125 | Not Available | Positive | 4088592 - 4089272 | 23697.4 |
| thaumatin family protein | AMED_RS19130 | Not Available | Negative | 4089300 - 4090049 | 25959.9 |
| glycoside hydrolase family protein | AMED_RS19135 | Not Available | Negative | 4090095 - 4090904 | 28377.4 |
| cysteine/serine endopeptidase inhibitor | AMED_RS19140 | Not Available | Negative | 4090986 - 4091399 | 14328.0 |
| sgnh/gdsl hydrolase family protein | AMED_RS19145 | Not Available | Negative | 4091583 - 4092329 | 25533.1 |
| response regulator transcription factor | AMED_RS19150 | Not Available | Positive | 4092432 - 4093106 | 24475.5 |
| hamp domain-containing sensor histidine kinase | AMED_RS19155 | Not Available | Positive | 4093103 - 4094533 | 50795.9 |
| hypothetical protein | AMED_RS19160 | Not Available | Positive | 4094530 - 4095009 | 16804.4 |
| acyltransferase | AMED_RS19165 | Not Available | Negative | 4094996 - 4096198 | 42620.6 |
| sam-dependent methyltransferase | AMED_RS19170 | Not Available | Positive | 4096314 - 4097162 | 30732.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
