Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | AMED_RS19075 | Not Available | Negative | 4079011 - 4080075 | 37459.4 |
| arac family transcriptional regulator | AMED_RS19080 | Not Available | Positive | 4080165 - 4081070 | 32478.9 |
| tetr/acrr family transcriptional regulator | AMED_RS19085 | Not Available | Negative | 4081176 - 4081754 | 20965.7 |
| fad-dependent monooxygenase | AMED_RS19090 | Not Available | Positive | 4081825 - 4083378 | 55164.8 |
| vanadium-dependent haloperoxidase | AMED_RS19095 | Not Available | Positive | 4083626 - 4085122 | 55031.3 |
| hypothetical protein | AMED_RS19100 | Not Available | Negative | 4085223 - 4085957 | 25647.2 |
| ydei/ompd-associated family protein | AMED_RS19105 | Not Available | Negative | 4086106 - 4086384 | 10064.0 |
| hypothetical protein | AMED_RS19110 | Not Available | Negative | 4086396 - 4086575 | 6176.17 |
| vanadium-dependent haloperoxidase | AMED_RS19115 | Not Available | Negative | 4086628 - 4087899 | 44376.7 |
| rna polymerase sigma factor | AMED_RS19120 | Not Available | Positive | 4088014 - 4088595 | 21437.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
