Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMED_RS19025 | Not Available | Positive | 4063658 - 4065340 | 60422.0 |
| abc transporter permease | AMED_RS19030 | Not Available | Positive | 4065344 - 4066333 | 35156.4 |
| dipeptide/oligopeptide/nickel abc transporter permease/atp-binding protein | AMED_RS19035 | Not Available | Positive | 4066349 - 4068163 | 65164.8 |
| abc transporter atp-binding protein | AMED_RS19040 | Not Available | Positive | 4068160 - 4069122 | 34745.7 |
| glycoside hydrolase family 2 protein | AMED_RS19045 | Not Available | Positive | 4069273 - 4071717 | 90311.8 |
| laci family dna-binding transcriptional regulator | AMED_RS19050 | Not Available | Positive | 4071718 - 4072566 | 30193.3 |
| glycosyl hydrolase | AMED_RS19055 | Not Available | Positive | 4072832 - 4074274 | 51590.2 |
| sgnh/gdsl hydrolase family protein | AMED_RS19060 | Not Available | Negative | 4074328 - 4075428 | 38058.7 |
| rok family transcriptional regulator | AMED_RS19065 | Not Available | Negative | 4075530 - 4076684 | 39497.2 |
| alpha-galactosidase | AMED_RS19070 | Not Available | Positive | 4076812 - 4078974 | 77648.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
