Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS18985 | Not Available | Negative | 4056453 - 4056806 | 12102.1 |
| hypothetical protein | AMED_RS49465 | Not Available | Positive | 4057234 - 4057362 | 4855.73 |
| gh25 family lysozyme | AMED_RS18990 | Not Available | Positive | 4057418 - 4058275 | 29675.2 |
| hypothetical protein | AMED_RS18995 | Not Available | Negative | 4058334 - 4058660 | 10993.0 |
| cbs domain-containing protein | AMED_RS19000 | Not Available | Positive | 4058846 - 4059292 | 16014.5 |
| metal-dependent hydrolase | AMED_RS49675 | Not Available | Positive | 4059297 - 4059584 | 10055.8 |
| metal-dependent hydrolase | AMED_RS49680 | Not Available | Positive | 4059588 - 4059881 | 10547.6 |
| phb depolymerase family esterase | AMED_RS19010 | Not Available | Positive | 4059980 - 4060885 | 32535.3 |
| age family epimerase/isomerase | AMED_RS19015 | Not Available | Positive | 4060956 - 4062194 | 45401.3 |
| rok family transcriptional regulator | AMED_RS19020 | Not Available | Negative | 4062180 - 4063457 | 44116.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
