Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS18940 | Not Available | Negative | 4047260 - 4048570 | 43726.4 |
| zinc-dependent alcohol dehydrogenase family protein | AMED_RS18945 | Not Available | Negative | 4048643 - 4049659 | 36002.9 |
| helix-turn-helix transcriptional regulator | AMED_RS18950 | Not Available | Positive | 4049806 - 4050669 | 31594.3 |
| helix-turn-helix domain-containing protein | AMED_RS18955 | Not Available | Negative | 4050585 - 4051550 | 35339.4 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS18960 | Not Available | Positive | 4051680 - 4051868 | 6290.67 |
| cyclophilin-like fold protein | AMED_RS18965 | Not Available | Positive | 4051865 - 4052296 | 15800.9 |
| pp2c family serine/threonine-protein phosphatase | AMED_RS18970 | Not Available | Negative | 4052278 - 4053003 | 25722.2 |
| hypothetical protein | AMED_RS49460 | Not Available | Positive | 4053051 - 4053179 | 4361.43 |
| duf6185 family protein | AMED_RS18975 | Not Available | Negative | 4053160 - 4055766 | 94086.6 |
| dihydrofolate reductase family protein | AMED_RS18980 | Not Available | Positive | 4055803 - 4056288 | 17710.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
