Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | AMED_RS18885 | Not Available | Positive | 4037283 - 4039355 | 71656.2 |
| hypothetical protein | AMED_RS18890 | Not Available | Negative | 4039566 - 4039982 | 15332.0 |
| hypothetical protein | AMED_RS18895 | Not Available | Negative | 4040307 - 4040531 | 7448.87 |
| cupin domain-containing protein | AMED_RS18900 | Not Available | Negative | 4040667 - 4041074 | 14691.2 |
| carboxymuconolactone decarboxylase family protein | AMED_RS18905 | Not Available | Negative | 4041092 - 4041421 | 11893.2 |
| mfs transporter | AMED_RS18910 | Not Available | Negative | 4041418 - 4042806 | 46549.5 |
| helix-turn-helix transcriptional regulator | AMED_RS18915 | Not Available | Positive | 4042907 - 4043800 | 32724.5 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | AMED_RS18920 | Not Available | Negative | 4043821 - 4046016 | 79030.9 |
| metal-dependent hydrolase | AMED_RS18930 | Not Available | Negative | 4046013 - 4046728 | 24582.0 |
| (2fe-2s)-binding protein | AMED_RS18935 | Not Available | Negative | 4046733 - 4047344 | 21110.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
