Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS18835 | Not Available | Negative | 4026658 - 4027098 | 15196.8 |
| tetr/acrr family transcriptional regulator | AMED_RS18840 | Not Available | Negative | 4027213 - 4027884 | 24474.2 |
| sdr family oxidoreductase | AMED_RS18845 | Not Available | Positive | 4027989 - 4028768 | 26565.5 |
| lrp/asnc family transcriptional regulator | AMED_RS18850 | Not Available | Positive | 4028994 - 4029473 | 17933.4 |
| dmt family transporter | AMED_RS18855 | Not Available | Negative | 4029483 - 4030409 | 30857.1 |
| nadp-dependent oxidoreductase | AMED_RS18860 | Not Available | Positive | 4030700 - 4031638 | 31951.2 |
| alpha/beta hydrolase | AMED_RS18865 | Not Available | Positive | 4031669 - 4032619 | 33524.8 |
| nmra/hscarg family protein | AMED_RS18870 | Not Available | Positive | 4032669 - 4033616 | 33771.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS18875 | Not Available | Positive | 4033695 - 4034198 | 17893.4 |
| glycoside hydrolase family 2 | AMED_RS18880 | Not Available | Positive | 4034415 - 4037228 | 100343.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
