Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS01790 | Not Available | Positive | 366003 - 366257 | 8827.39 |
| sco6745 family protein | AMED_RS01795 | Not Available | Positive | 366417 - 367193 | 27772.2 |
| Trna-glu | Not Available | Not Available | Positive | 367311 - 367383 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 367406 - 367479 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 367511 - 367584 | Not Available |
| site-specific integrase | AMED_RS01815 | Not Available | Negative | 367674 - 369020 | 51769.9 |
| excisionase family dna-binding protein | AMED_RS01820 | Not Available | Negative | 369036 - 369338 | 10654.7 |
| duf3631 domain-containing protein | AMED_RS01825 | Not Available | Negative | 369659 - 371008 | 48453.3 |
| dna cytosine methyltransferase | AMED_RS01830 | Not Available | Negative | 371064 - 372689 | 58455.8 |
| hypothetical protein | AMED_RS01835 | Not Available | Negative | 372689 - 373042 | 13055.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
