Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--poly(phosphoribitol) ligase | AMED_RS18740 | Not Available | Negative | 4006416 - 4007927 | 53724.0 |
| acyl carrier protein | AMED_RS18745 | Not Available | Negative | 4007920 - 4008195 | 9612.32 |
| condensation domain-containing protein | AMED_RS18750 | Not Available | Negative | 4008192 - 4011053 | 102474.0 |
| non-ribosomal peptide synthetase | AMED_RS18755 | Not Available | Negative | 4011050 - 4012906 | 64187.1 |
| duf2231 domain-containing protein | AMED_RS18765 | Not Available | Negative | 4014322 - 4014876 | 19292.6 |
| fad:protein fmn transferase | AMED_RS18770 | Not Available | Negative | 4014925 - 4015668 | 27049.7 |
| fmn-binding protein | AMED_RS18775 | Not Available | Negative | 4015665 - 4016096 | 14871.1 |
| ferric reductase-like transmembrane domain-containing protein | AMED_RS18780 | Not Available | Negative | 4016112 - 4017494 | 50667.5 |
| hamp domain-containing sensor histidine kinase | AMED_RS18785 | Not Available | Negative | 4017543 - 4018922 | 48744.7 |
| response regulator transcription factor | AMED_RS18790 | Not Available | Negative | 4018919 - 4019611 | 25528.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
