Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AMED_RS18590 | Not Available | Negative | 3964395 - 3965165 | 26714.7 |
| serine hydrolase | AMED_RS18595 | Not Available | Negative | 3965174 - 3966265 | 38244.7 |
| hypothetical protein | AMED_RS18600 | Not Available | Positive | 3966730 - 3966888 | 5642.83 |
| sgcj/ecac family oxidoreductase | AMED_RS18605 | Not Available | Negative | 3967013 - 3967366 | 13109.5 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS18610 | Not Available | Negative | 3967370 - 3968077 | 23781.4 |
| lysr family transcriptional regulator | AMED_RS18615 | Not Available | Positive | 3968200 - 3969120 | 33393.6 |
| rna polymerase sigma factor | AMED_RS18620 | Not Available | Positive | 3969622 - 3970236 | 22215.1 |
| hypothetical protein | AMED_RS18625 | Not Available | Positive | 3970236 - 3970994 | 26970.2 |
| glycosylhydrolase-like jelly roll fold domain-containing protein | AMED_RS18630 | Not Available | Negative | 3971707 - 3975060 | 119029.0 |
| family 78 glycoside hydrolase catalytic domain | AMED_RS18635 | Not Available | Positive | 3975319 - 3978507 | 113673.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
