Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS48695 | Not Available | Positive | 3957145 - 3957756 | 22200.9 |
| hypothetical protein | AMED_RS18545 | Not Available | Positive | 3958155 - 3959081 | 34730.8 |
| hypothetical protein | AMED_RS18550 | Not Available | Positive | 3959412 - 3959732 | 11236.3 |
| metal-dependent hydrolase | AMED_RS18555 | Not Available | Negative | 3960091 - 3960390 | 10357.2 |
| metal-dependent hydrolase | AMED_RS48700 | Not Available | Negative | 3960437 - 3960577 | 5427.65 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS18565 | Not Available | Positive | 3960679 - 3961119 | 16523.6 |
| hypothetical protein | AMED_RS18570 | Not Available | Negative | 3961171 - 3961515 | 12503.9 |
| tetr/acrr family transcriptional regulator | AMED_RS18575 | Not Available | Negative | 3961759 - 3962331 | 19275.9 |
| voc family protein | AMED_RS18580 | Not Available | Positive | 3962602 - 3963747 | 38958.8 |
| hypothetical protein | AMED_RS18585 | Not Available | Positive | 3964084 - 3964308 | 7638.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
