Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS18440 | Not Available | Negative | 3931915 - 3932742 | 29724.0 |
| acyl carrier protein | AMED_RS18445 | Not Available | Negative | 3932749 - 3933006 | 9320.02 |
| alanine racemase | AMED_RS18450 | Not Available | Negative | 3933027 - 3934310 | 46021.9 |
| atp-grasp domain-containing protein | AMED_RS18455 | Not Available | Negative | 3934307 - 3935668 | 49382.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | AMED_RS18460 | Not Available | Negative | 3935681 - 3936619 | 34095.9 |
| condensation domain-containing protein | AMED_RS18465 | Not Available | Positive | 3936787 - 3938568 | 64371.3 |
| abc transporter atp-binding protein | AMED_RS18470 | Not Available | Positive | 3938579 - 3939436 | 30728.9 |
| abc transporter permease | AMED_RS18475 | Not Available | Positive | 3939433 - 3940278 | 29997.6 |
| carbamoyltransferase c-terminal domain-containing protein | AMED_RS18480 | Not Available | Positive | 3940278 - 3942143 | 66909.6 |
| membrane protein | AMED_RS49445 | Not Available | Negative | 3942411 - 3943688 | 39899.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
