Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMED_RS18390 | Not Available | Positive | 3920360 - 3920578 | 8331.91 |
| gh25 family lysozyme | AMED_RS18395 | Not Available | Positive | 3921124 - 3922437 | 45363.3 |
| d-ala-d-ala carboxypeptidase family metallohydrolase | AMED_RS18400 | Not Available | Positive | 3922461 - 3923201 | 25999.3 |
| helix-turn-helix domain-containing protein | AMED_RS18405 | Not Available | Negative | 3923253 - 3924215 | 34506.7 |
| hypothetical protein | AMED_RS18410 | Not Available | Negative | 3924461 - 3924715 | 9031.17 |
| btad domain-containing putative transcriptional regulator | AMED_RS18415 | Not Available | Negative | 3925336 - 3928188 | 102645.0 |
| luxr family transcriptional regulator | AMED_RS18420 | Not Available | Positive | 3928486 - 3929778 | 46232.5 |
| holo-acp synthase | AMED_RS18425 | Not Available | Negative | 3929784 - 3930152 | 12677.5 |
| acyl-coa dehydrogenase family protein | AMED_RS18430 | Not Available | Negative | 3930136 - 3931335 | 43456.1 |
| acyl-coa dehydrogenase family protein | AMED_RS18435 | Not Available | Negative | 3931328 - 3931918 | 20741.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
