Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS18340 | Not Available | Negative | 3909971 - 3910528 | 20353.3 |
| sdr family oxidoreductase | AMED_RS18345 | Not Available | Positive | 3910612 - 3911349 | 25847.0 |
| wd40 repeat domain-containing protein | AMED_RS18350 | Not Available | Positive | 3911587 - 3915321 | 132961.0 |
| hypothetical protein | AMED_RS18355 | Not Available | Positive | 3915560 - 3915895 | 11994.1 |
| hypothetical protein | AMED_RS18360 | Not Available | Negative | 3916040 - 3916363 | 10774.5 |
| merr family transcriptional regulator | AMED_RS18365 | Not Available | Negative | 3916360 - 3917121 | 26899.9 |
| hypothetical protein | AMED_RS18370 | Not Available | Negative | 3917237 - 3917437 | 7607.09 |
| sigma-70 family rna polymerase sigma factor | AMED_RS18375 | Not Available | Negative | 3917450 - 3918403 | 35365.3 |
| hypothetical protein | AMED_RS18380 | Not Available | Negative | 3918460 - 3919167 | 26517.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS18385 | Not Available | Negative | 3919228 - 3920043 | 28080.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
