Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | AMED_RS01745 | Not Available | Positive | 354923 - 356581 | 59055.8 |
| hypothetical protein | AMED_RS47905 | Not Available | Positive | 356785 - 356958 | 5991.71 |
| cold-shock protein | AMED_RS01750 | Not Available | Positive | 357166 - 357369 | 7268.42 |
| heavy-metal-associated domain-containing protein | AMED_RS01755 | Not Available | Positive | 357434 - 357649 | 7455.73 |
| atp-nad kinase family protein | AMED_RS01760 | Not Available | Positive | 357852 - 358886 | 35570.9 |
| thiamine pyrophosphate-dependent enzyme | AMED_RS01765 | Not Available | Positive | 358883 - 359626 | 25920.8 |
| gaf domain-containing protein | AMED_RS01770 | Not Available | Positive | 359724 - 360986 | 44842.9 |
| hypothetical protein | AMED_RS01775 | Not Available | Positive | 361442 - 362860 | 48978.2 |
| glutamate abc transporter substrate-binding protein | AMED_RS01780 | Not Available | Positive | 362992 - 363936 | 33275.4 |
| metal-dependent hydrolase | AMED_RS01785 | Not Available | Positive | 364010 - 365473 | 51844.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
