Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m15 family metallopeptidase | AMED_RS18190 | Not Available | Positive | 3878989 - 3879681 | 24604.8 |
| cytochrome p450 | AMED_RS18195 | Not Available | Negative | 3879756 - 3880943 | 43386.9 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS18200 | Not Available | Negative | 3880940 - 3881380 | 15544.5 |
| ricin domain-containing protein | AMED_RS18205 | Not Available | Negative | 3881557 - 3884412 | 103277.0 |
| response regulator transcription factor | AMED_RS18210 | Not Available | Positive | 3884642 - 3885322 | 24683.6 |
| sensor histidine kinase kdpd | AMED_RS18215 | Not Available | Positive | 3885319 - 3886623 | 45470.9 |
| duf1501 domain-containing protein | AMED_RS18220 | Not Available | Negative | 3886627 - 3887835 | 42036.8 |
| duf1800 family protein | AMED_RS18225 | Not Available | Negative | 3887832 - 3889133 | 46080.8 |
| beta-propeller fold lactonase family protein | AMED_RS18230 | Not Available | Negative | 3889240 - 3890433 | 42278.3 |
| polysaccharide deacetylase family protein | AMED_RS18235 | Not Available | Negative | 3890438 - 3891208 | 26553.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
