Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | AMED_RS18135 | Not Available | Negative | 3866352 - 3867116 | 27111.6 |
| helix-turn-helix transcriptional regulator | AMED_RS18140 | Not Available | Positive | 3867216 - 3868070 | 31833.9 |
| hypothetical protein | AMED_RS18145 | Not Available | Positive | 3868201 - 3869328 | 40746.2 |
| isoamylase | AMED_RS18150 | Not Available | Negative | 3869343 - 3869627 | 10162.8 |
| hypothetical protein | AMED_RS18155 | Not Available | Negative | 3869792 - 3871054 | 44697.5 |
| chat domain-containing protein | AMED_RS18160 | Not Available | Negative | 3871068 - 3872378 | 47655.7 |
| aaa family atpase | AMED_RS18165 | Not Available | Negative | 3872375 - 3873739 | 51986.4 |
| chat domain-containing protein | AMED_RS18170 | Not Available | Negative | 3873736 - 3875874 | 79790.5 |
| hypothetical protein | AMED_RS18175 | Not Available | Positive | 3876158 - 3877195 | 36366.7 |
| nad(p)h-binding protein | AMED_RS18185 | Not Available | Negative | 3877672 - 3878532 | 30477.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
