Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | AMED_RS18085 | Not Available | Negative | 3855119 - 3856621 | 52972.1 |
| hypothetical protein | AMED_RS18090 | Not Available | Negative | 3857285 - 3858592 | 45729.4 |
| hypothetical protein | AMED_RS18095 | Not Available | Positive | 3859117 - 3860598 | 52584.3 |
| helix-turn-helix transcriptional regulator | AMED_RS18100 | Not Available | Negative | 3860729 - 3861619 | 32586.1 |
| sdr family oxidoreductase | AMED_RS18105 | Not Available | Negative | 3861703 - 3862506 | 28131.7 |
| ribonuclease domain-containing protein | AMED_RS18110 | Not Available | Positive | 3862824 - 3863228 | 14696.0 |
| srpbcc family protein | AMED_RS18115 | Not Available | Negative | 3863269 - 3863715 | 16323.3 |
| helix-turn-helix domain-containing protein | AMED_RS18120 | Not Available | Negative | 3863774 - 3864664 | 32601.9 |
| tetr/acrr family transcriptional regulator | AMED_RS18125 | Not Available | Negative | 3864737 - 3865342 | 21232.4 |
| sdr family oxidoreductase | AMED_RS18130 | Not Available | Positive | 3865452 - 3866270 | 28468.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
