Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cgnr zinc finger domain-containing protein | AMED_RS18035 | Not Available | Negative | 3844313 - 3844888 | 21035.8 |
| mfs transporter | AMED_RS18040 | Not Available | Positive | 3845016 - 3846236 | 41652.2 |
| alpha/beta fold hydrolase | AMED_RS18045 | Not Available | Positive | 3846272 - 3847231 | 34236.9 |
| tetr/acrr family transcriptional regulator | AMED_RS18050 | Not Available | Positive | 3847218 - 3847817 | 21402.4 |
| sensor histidine kinase | AMED_RS18055 | Not Available | Positive | 3847903 - 3849039 | 39715.9 |
| response regulator transcription factor | AMED_RS18060 | Not Available | Positive | 3849036 - 3849740 | 24716.0 |
| serine hydrolase | AMED_RS18065 | Not Available | Positive | 3849916 - 3851106 | 42290.4 |
| coa transferase | AMED_RS18070 | Not Available | Negative | 3851143 - 3852687 | 55576.7 |
| acyclic terpene utilization atua family protein | AMED_RS18075 | Not Available | Negative | 3852702 - 3854462 | 62521.9 |
| tetr/acrr family transcriptional regulator | AMED_RS18080 | Not Available | Positive | 3854525 - 3855109 | 21181.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
