Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin family protein | AMED_RS17885 | Not Available | Positive | 3805797 - 3806501 | 25794.3 |
| cation:proton antiporter | AMED_RS17890 | Not Available | Positive | 3806506 - 3807696 | 40071.7 |
| rna polymerase sigma factor | AMED_RS17895 | Not Available | Positive | 3807738 - 3808370 | 22931.3 |
| anti-sigma factor | AMED_RS17900 | Not Available | Positive | 3808370 - 3808600 | 8673.12 |
| srpbcc family protein | AMED_RS17905 | Not Available | Negative | 3808609 - 3809061 | 16625.0 |
| alpha/beta fold hydrolase | AMED_RS17910 | Not Available | Negative | 3809100 - 3809537 | 15610.6 |
| zinc-binding dehydrogenase | AMED_RS17915 | Not Available | Positive | 3809653 - 3809943 | 10585.9 |
| tigr01777 family oxidoreductase | AMED_RS17920 | Not Available | Positive | 3809974 - 3810867 | 31278.4 |
| dead/deah box helicase | AMED_RS17925 | Not Available | Positive | 3810966 - 3813983 | 108696.0 |
| hypothetical protein | AMED_RS17930 | Not Available | Positive | 3813976 - 3814707 | 25781.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
