Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | AMED_RS17835 | Not Available | Positive | 3795561 - 3798311 | 97071.9 |
| heavy-metal-associated domain-containing protein | AMED_RS17840 | Not Available | Positive | 3798546 - 3798752 | 6803.95 |
| hypothetical protein | AMED_RS17845 | Not Available | Positive | 3798781 - 3799683 | 30602.9 |
| cation-translocating p-type atpase | AMED_RS17850 | Not Available | Positive | 3799702 - 3801969 | 77655.8 |
| m56 family metallopeptidase | AMED_RS17855 | Not Available | Negative | 3802006 - 3802935 | 32459.2 |
| blai/meci/copy family transcriptional regulator | AMED_RS17860 | Not Available | Negative | 3802932 - 3803294 | 14001.8 |
| duf305 domain-containing protein | AMED_RS17865 | Not Available | Negative | 3803388 - 3803978 | 20812.3 |
| duf6153 family protein | AMED_RS17870 | Not Available | Negative | 3804037 - 3804447 | 13814.9 |
| hypothetical protein | AMED_RS17875 | Not Available | Negative | 3804580 - 3804888 | 11129.2 |
| hypothetical protein | AMED_RS17880 | Not Available | Positive | 3805108 - 3805515 | 14569.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
