Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | AMED_RS17685 | Not Available | Positive | 3764896 - 3765825 | 31603.1 |
| beta-1,3-glucanase family protein | AMED_RS17690 | Not Available | Negative | 3765831 - 3767474 | 56498.4 |
| hypothetical protein | AMED_RS17695 | Not Available | Negative | 3767677 - 3768129 | 15443.5 |
| srpbcc family protein | AMED_RS17700 | Not Available | Negative | 3768201 - 3768680 | 17795.3 |
| fad-dependent oxidoreductase | AMED_RS17705 | Not Available | Negative | 3768692 - 3770056 | 48644.6 |
| carbohydrate kinase family protein | AMED_RS17710 | Not Available | Negative | 3770043 - 3770996 | 31737.0 |
| class ii aldolase/adducin family protein | AMED_RS17715 | Not Available | Negative | 3770993 - 3771667 | 23059.7 |
| multidrug efflux smr transporter | AMED_RS17720 | Not Available | Positive | 3771807 - 3772145 | 11225.8 |
| multidrug efflux smr transporter | AMED_RS17725 | Not Available | Positive | 3772145 - 3772468 | 10887.8 |
| sdr family oxidoreductase | AMED_RS17730 | Not Available | Positive | 3772481 - 3773245 | 26178.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
