Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3756229 - 3756300 | Not Available |
| tetr/acrr family transcriptional regulator | AMED_RS17640 | Not Available | Negative | 3756473 - 3757069 | 21968.6 |
| class i sam-dependent methyltransferase | AMED_RS17645 | Not Available | Positive | 3757163 - 3757921 | 27708.7 |
| duf4287 domain-containing protein | AMED_RS17650 | Not Available | Positive | 3757991 - 3758245 | 8993.77 |
| sdr family oxidoreductase | AMED_RS17655 | Not Available | Negative | 3758778 - 3759554 | 25957.3 |
| mfs transporter | AMED_RS17660 | Not Available | Negative | 3759680 - 3761125 | 47934.1 |
| cytochrome p450 | AMED_RS17665 | Not Available | Positive | 3761227 - 3762432 | 43727.9 |
| transcriptional repressor lexa | AMED_RS17670 | Not Available | Negative | 3762434 - 3763087 | 23445.8 |
| lytic polysaccharide monooxygenase auxiliary activity family 9 protein | AMED_RS17675 | Not Available | Positive | 3763361 - 3763873 | 18072.3 |
| helix-turn-helix domain-containing protein | AMED_RS17680 | Not Available | Positive | 3763981 - 3764835 | 30209.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
