Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | AMED_RS17585 | Not Available | Positive | 3742670 - 3743773 | 39057.4 |
| serine hydrolase | AMED_RS17590 | Not Available | Positive | 3743792 - 3745177 | 48862.2 |
| serine hydrolase | AMED_RS17595 | Not Available | Positive | 3745174 - 3745689 | 18216.3 |
| abc transporter substrate-binding protein | AMED_RS17600 | Not Available | Positive | 3745686 - 3747269 | 54306.3 |
| abc transporter permease | AMED_RS17605 | Not Available | Positive | 3747266 - 3748246 | 34090.6 |
| dipeptide/oligopeptide/nickel abc transporter permease/atp-binding protein | AMED_RS17610 | Not Available | Positive | 3748248 - 3750131 | 65186.3 |
| abc transporter atp-binding protein | AMED_RS17615 | Not Available | Positive | 3750128 - 3751084 | 33609.4 |
| serine hydrolase | AMED_RS17620 | Not Available | Positive | 3751081 - 3754404 | 117211.0 |
| dha2 family efflux mfs transporter permease subunit | AMED_RS17625 | Not Available | Negative | 3754486 - 3755949 | 50586.4 |
| Trna-val | Not Available | Not Available | Positive | 3756117 - 3756191 | Not Available |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
