Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | AMED_RS17535 | Not Available | Negative | 3731505 - 3733808 | 78835.6 |
| zinc-binding alcohol dehydrogenase family protein | AMED_RS17540 | Not Available | Positive | 3734028 - 3735029 | 34755.6 |
| nad(p)h-binding protein | AMED_RS17545 | Not Available | Positive | 3735109 - 3735963 | 29158.8 |
| hypothetical protein | AMED_RS17550 | Not Available | Positive | 3736080 - 3737327 | 43579.7 |
| hypothetical protein | AMED_RS17555 | Not Available | Negative | 3737378 - 3737578 | 7048.35 |
| duf6010 family protein | AMED_RS17560 | Not Available | Negative | 3737580 - 3737993 | 14797.3 |
| tetr/acrr family transcriptional regulator | AMED_RS17565 | Not Available | Positive | 3738234 - 3738875 | 23129.6 |
| amidohydrolase family protein | AMED_RS17570 | Not Available | Positive | 3739166 - 3740638 | 51493.1 |
| m20 family metallopeptidase | AMED_RS17575 | Not Available | Positive | 3740635 - 3741756 | 38508.8 |
| hypothetical protein | AMED_RS17580 | Not Available | Positive | 3741780 - 3742673 | 30746.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
