Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase family protein | AMED_RS17435 | Not Available | Negative | 3713310 - 3713885 | 20755.5 |
| hypothetical protein | AMED_RS17440 | Not Available | Positive | 3714127 - 3714705 | 20243.6 |
| tmem175 family protein | AMED_RS17445 | Not Available | Negative | 3714730 - 3715368 | 23717.2 |
| rlua family pseudouridine synthase | AMED_RS17450 | Not Available | Negative | 3715413 - 3716348 | 35350.8 |
| duf5313 domain-containing protein | AMED_RS17455 | Not Available | Negative | 3716371 - 3716748 | 14406.5 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS17460 | Not Available | Positive | 3716834 - 3717271 | 16237.8 |
| tigr03854 family llm class f420-dependent oxidoreductase | AMED_RS17465 | Not Available | Positive | 3717325 - 3718206 | 31562.0 |
| hypothetical protein | AMED_RS17470 | Not Available | Negative | 3718203 - 3718988 | 27674.1 |
| glsb/yeaq/ymge family stress response membrane protein | AMED_RS17475 | Not Available | Negative | 3719083 - 3719343 | 9132.72 |
| mbl fold metallo-hydrolase | AMED_RS17480 | Not Available | Negative | 3719444 - 3720337 | 33145.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
