Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | AMED_RS17385 | Not Available | Positive | 3700161 - 3701585 | 50422.9 |
| glycosyl hydrolase 2 galactose-binding domain-containing protein | AMED_RS17390 | Not Available | Positive | 3701582 - 3704401 | 100922.0 |
| rok family protein | AMED_RS17395 | Not Available | Positive | 3704398 - 3705288 | 29721.8 |
| mfs transporter | AMED_RS17400 | Not Available | Negative | 3705336 - 3706544 | 41592.7 |
| laci family dna-binding transcriptional regulator | AMED_RS17405 | Not Available | Negative | 3706827 - 3707822 | 35052.2 |
| peptide-n4-asparagine amidase | AMED_RS17410 | Not Available | Positive | 3707954 - 3709615 | 59438.8 |
| class i sam-dependent methyltransferase | AMED_RS17415 | Not Available | Positive | 3709626 - 3710270 | 22645.1 |
| cytochrome p450 | AMED_RS17420 | Not Available | Positive | 3710324 - 3711601 | 46323.8 |
| duf1152 domain-containing protein | AMED_RS17425 | Not Available | Negative | 3711609 - 3712565 | 33461.0 |
| alpha-ketoglutarate-dependent dioxygenase alkb | AMED_RS17430 | Not Available | Negative | 3712609 - 3713235 | 22703.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
