Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | AMED_RS01645 | Not Available | Negative | 334238 - 334780 | 20418.0 |
| duf11 domain-containing protein | AMED_RS01650 | Not Available | Positive | 334991 - 335839 | 28326.4 |
| aaa family atpase | AMED_RS01655 | Not Available | Negative | 335892 - 336428 | 19098.0 |
| Trna-lys | Not Available | Not Available | Positive | 336540 - 336612 | Not Available |
| hypothetical protein | AMED_RS01665 | Not Available | Negative | 336996 - 337232 | 8818.4 |
| hypothetical protein | AMED_RS01670 | Not Available | Positive | 337305 - 337748 | 16260.1 |
| hypothetical protein | AMED_RS01675 | Not Available | Negative | 337823 - 338713 | 31166.5 |
| glycosyltransferase family 2 protein | AMED_RS01680 | Not Available | Negative | 338863 - 340182 | 49743.3 |
| hypothetical protein | AMED_RS48220 | Not Available | Negative | 340524 - 340733 | 7680.36 |
| hypothetical protein | AMED_RS01690 | Not Available | Positive | 340765 - 344421 | 117043.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
