Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AMED_RS17235 | Not Available | Negative | 3666424 - 3667164 | 26765.9 |
| voc family protein | AMED_RS17240 | Not Available | Negative | 3667274 - 3667696 | 15534.4 |
| gntr family transcriptional regulator | AMED_RS17245 | Not Available | Positive | 3667742 - 3668398 | 23976.6 |
| dna/rna non-specific endonuclease | AMED_RS17250 | Not Available | Negative | 3668402 - 3670324 | 69752.5 |
| coce/nond family hydrolase | AMED_RS17255 | Not Available | Negative | 3670457 - 3672073 | 58829.8 |
| tetr/acrr family transcriptional regulator | AMED_RS17260 | Not Available | Negative | 3672070 - 3672678 | 21762.9 |
| zinc-binding dehydrogenase | AMED_RS17265 | Not Available | Positive | 3672759 - 3673772 | 34581.5 |
| alpha/beta fold hydrolase | AMED_RS17270 | Not Available | Negative | 3673778 - 3674698 | 33355.4 |
| adenylate/guanylate cyclase domain-containing protein | AMED_RS17275 | Not Available | Negative | 3674742 - 3676298 | 53477.4 |
| diiron oxygenase | AMED_RS17280 | Not Available | Positive | 3676405 - 3677307 | 34306.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
