Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitronate monooxygenase family protein | AMED_RS17185 | Not Available | Positive | 3655678 - 3656733 | 36477.6 |
| glucose-6-phosphate dehydrogenase (coenzyme-f420) | AMED_RS17190 | Not Available | Positive | 3656741 - 3657742 | 37158.1 |
| acetyl-coa c-acetyltransferase | AMED_RS17195 | Not Available | Negative | 3657815 - 3658966 | 40747.2 |
| sdr family oxidoreductase | AMED_RS17200 | Not Available | Negative | 3658975 - 3659745 | 27108.4 |
| acyl-coa dehydrogenase family protein | AMED_RS17205 | Not Available | Negative | 3659742 - 3660887 | 41917.8 |
| fadd3 family acyl-coa ligase | AMED_RS17210 | Not Available | Positive | 3660970 - 3662502 | 53880.6 |
| enoyl-coa hydratase | AMED_RS17215 | Not Available | Positive | 3662499 - 3663344 | 30997.9 |
| acyl-coa dehydrogenase family protein | AMED_RS17220 | Not Available | Positive | 3663344 - 3664474 | 41794.6 |
| acyl-coa dehydrogenase family protein | AMED_RS17225 | Not Available | Positive | 3664471 - 3665388 | 31657.2 |
| acyl-coa dehydrogenase family protein | AMED_RS17230 | Not Available | Positive | 3665385 - 3666434 | 36629.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
