Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipase family protein | AMED_RS48250 | Not Available | Positive | 3648031 - 3648636 | 21532.2 |
| cutinase family protein | AMED_RS49435 | Not Available | Negative | 3648709 - 3648894 | 6409.6 |
| metal-dependent hydrolase | AMED_RS49440 | Not Available | Negative | 3649037 - 3649369 | 11263.5 |
| tetr/acrr family transcriptional regulator | AMED_RS17150 | Not Available | Negative | 3649546 - 3650283 | 25874.8 |
| helix-turn-helix domain-containing protein | AMED_RS17155 | Not Available | Positive | 3650512 - 3651639 | 41269.4 |
| sdr family oxidoreductase | AMED_RS17160 | Not Available | Positive | 3651718 - 3652485 | 26059.2 |
| sdr family oxidoreductase | AMED_RS17165 | Not Available | Positive | 3652482 - 3653360 | 30322.0 |
| enoyl-coa hydratase family protein | AMED_RS17170 | Not Available | Positive | 3653360 - 3654100 | 26445.5 |
| coa transferase subunit a | AMED_RS17175 | Not Available | Positive | 3654090 - 3654953 | 31168.0 |
| coa-transferase subunit beta | AMED_RS17180 | Not Available | Positive | 3654950 - 3655681 | 26383.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
